package main import ( "database/sql" "encoding/json" "errors" "fmt" "strings" ) var ( ErrSpeciesNotFound = errors.New("species not found") ErrSpeciesNotUpdated = errors.New("species not updated") ) func init() { DB.AddTableWithName(SpeciesBase{}, "species").SetKeys(true, "Id") } type SpeciesService struct{} // SpeciesBase is what the DB expects to see for inserts/updates type SpeciesBase struct { Id int64 `db:"id" json:"id"` SpeciesName string `db:"species_name" json:"speciesName"` TypeSpecies NullBool `db:"type_species" json:"typeSpecies"` Etymology NullString `db:"etymology" json:"etymology"` CreatedAt NullTime `db:"created_at" json:"createdAt"` UpdatedAt NullTime `db:"updated_at" json:"updatedAt"` DeletedAt NullTime `db:"deleted_at" json:"deletedAt"` CreatedBy int64 `db:"created_by" json:"createdBy"` UpdatedBy int64 `db:"updated_by" json:"updatedBy"` DeletedBy NullInt64 `db:"deleted_by" json:"deletedBy"` } // Species & SpeciesJSON(s) are what ember expects to see type Species struct { *SpeciesBase GenusName string `db:"genus_name" json:"genusName"` Strains NullSliceInt64 `db:"strains" json:"strains"` TotalStrains int64 `db:"total_strains" json:"totalStrains"` } type ManySpecies []*Species type SpeciesJSON struct { Species *Species `json:"species"` } type ManySpeciesJSON struct { ManySpecies *ManySpecies `json:"species"` } func (s *Species) marshal() ([]byte, error) { return json.Marshal(&SpeciesJSON{Species: s}) } func (s *ManySpecies) marshal() ([]byte, error) { return json.Marshal(&ManySpeciesJSON{ManySpecies: s}) } func (s SpeciesService) unmarshal(b []byte) (entity, error) { var sj SpeciesJSON err := json.Unmarshal(b, &sj) return sj.Species, err } func (s SpeciesService) list(opt *ListOptions) (entity, error) { if opt == nil { return nil, errors.New("must provide options") } var vals []interface{} sql := `SELECT sp.id, sp.species_name, sp.type_species, sp.etymology, sp.created_at, sp.created_by, sp.updated_at, sp.updated_by, sp.deleted_at, sp.deleted_by, g.genus_name, array_agg(st.id) AS strains, COUNT(st) AS total_strains FROM species sp INNER JOIN genera g ON g.id=sp.genus_id AND LOWER(g.genus_name)=$1 LEFT OUTER JOIN strains st ON st.species_id=sp.id` vals = append(vals, opt.Genus) if len(opt.Ids) != 0 { var conds []string s := "sp.id IN (" for i, id := range opt.Ids { s = s + fmt.Sprintf("$%v,", i+2) // start param index at 2 vals = append(vals, id) } s = s[:len(s)-1] + ")" conds = append(conds, s) sql += " WHERE (" + strings.Join(conds, ") AND (") + ")" } sql += " GROUP BY sp.id, g.genus_name;" var species ManySpecies err := DBH.Select(&species, sql, vals...) if err != nil { return nil, err } return &species, nil } func (s SpeciesService) get(id int64, genus string) (entity, error) { var species Species q := `SELECT sp.id, sp.species_name, sp.type_species, sp.etymology, sp.created_at, sp.created_by, sp.updated_at, sp.updated_by, sp.deleted_at, sp.deleted_by, g.genus_name, array_agg(st.id) AS strains, COUNT(st) AS total_strains FROM species sp INNER JOIN genera g ON g.id=sp.genus_id AND LOWER(g.genus_name)=$1 LEFT OUTER JOIN strains st ON st.species_id=sp.id WHERE sp.id=$2 GROUP BY sp.id, g.genus_name;` if err := DBH.SelectOne(&species, q, genus, id); err != nil { if err == sql.ErrNoRows { return nil, ErrStrainNotFound } return nil, err } return &species, nil }