thermokarst/ccdb-api
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

Treatment Replicate

Browse source
This commit is contained in:
Matthew Ryan Dillon 2016-02-01 14:59:19 -07:00
parent a8a87f7ddb
commit 6d7242aacc
5 changed files with 80 additions and 21 deletions
Download patch file Download diff file Expand all files Collapse all files

23
ccdb/utils/management/commands/import_data.py
View file

@ -13,11 +13,12 @@ from ccdb.misc.models import MeasurementUnit, MeasurementType, Container, \
from ccdb.locations.models import Region, Site, MunicipalLocation, \
StudyLocation, StorageLocation
from ccdb.species.models import Species, CollectionSpecies
from ccdb.processing.models import ProcessType, Reagent, Flaw, Processing
from ccdb.processing.models import ProcessType, Reagent, \
Flaw as ProcessingFlaw,Processing
from ccdb.collections_ccdb.models import CollectionType, CollectionMethod, \
Flaw, ADFGPermit, Collection
from ccdb.experiments.models import Flaw, Experiment, ProtocolAttachment, \
TreatmentType, Treatment
Flaw as CollectionFlaw, ADFGPermit, Collection
from ccdb.experiments.models import Flaw as ExperimentFlaw, Experiment, \
ProtocolAttachment, TreatmentType, Treatment, TreatmentReplicate
class Command(BaseCommand):
@ -236,3 +237,17 @@ def _import_admin_data():
t = Treatment(id=r[0], treatment_type_id=r[1], container_id=r[2],
study_location_id=r[3], species_id=r[4], sex=r[5])
t.save()
# Treatment Replicate
for r in c.execute('''
SELECT *, setup_date AS "setup_date [dtdt]"
FROM tbl_treatment_replicates tr
INNER JOIN tbl_lu_record_flaws f ON f.flawid=tr.flawid;
'''):
if r[10] is not '':
flaw, _ = ExperimentFlaw.objects.get_or_create(name=r[10])
else:
flaw = None
tr = TreatmentReplicate(treatment_id=r[0], id=r[1], name=r[2],
setup_date=r[13], setup_sample_size=r[5], mass_g=r[6], flaw=flaw)
tr.save()