maint: stuff
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parent
2690012be5
commit
c7dcdf7784
3 changed files with 12 additions and 161 deletions
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@ -18,6 +18,9 @@ return require('packer').startup(function()
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-----------------------------------------------------------------------------
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use { 'habamax/vim-godot' }
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-----------------------------------------------------------------------------
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use { 'Bakudankun/PICO-8.vim' }
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-----------------------------------------------------------------------------
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use {
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'chriskempson/base16-vim',
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161
qiime2.toml
161
qiime2.toml
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@ -1,161 +0,0 @@
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# github-thermokarst-qiime2
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/thermokarst"
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origin.name = "thermokarst"
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repos = [
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"q2-no-op",
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"workflows-playground",
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]
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remotes = []
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# github-thermokarst-forks-qiime2
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/qiime2"
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origin.name = "qiime2"
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repos = [
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"Keemei",
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"action-library-packaging",
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"busywork",
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"conda-channel-resource",
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"data302",
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"dev-docs",
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"docs",
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"environment-files",
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"library",
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"logos",
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"package-integration",
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"paper1",
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"paper2",
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"q2-alignment",
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"q2-composition",
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"q2-cutadapt",
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"q2-dada2",
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"q2-deblur",
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"q2-demux",
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"q2-diversity",
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"q2-diversity-lib",
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"q2-emperor",
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"q2-feature-classifier",
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"q2-feature-table",
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"q2-fragment-insertion",
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"q2-gneiss",
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"q2-longitudinal",
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"q2-metadata",
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"q2-mystery-stew",
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"q2-phylogeny",
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"q2-quality-control",
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"q2-quality-filter",
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"q2-sample-classifier",
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"q2-taxa",
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"q2-types",
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"q2-vsearch",
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"q2cli",
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"q2cwl",
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"q2galaxy",
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"q2lint",
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"q2studio",
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"q2templates",
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"q2view",
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"qiime2",
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"qiime2.github.io",
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"sphinx-ext-qiime2",
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"sphinx-qiime2-theme",
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"static-site-infrastructure",
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"template-repo",
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"view.qiime2.org",
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"vm-playbooks",
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"workshop-playbooks",
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"workshops",
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]
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remotes = [
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{ name = "ChrisKeefe", base_addr = "ssh://git@github.com/ChrisKeefe" },
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{ name = "Keegan-Evans", base_addr = "ssh://git@github.com/Keegan-Evans" },
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{ name = "Oddant1", base_addr = "ssh://git@github.com/Oddant1" },
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{ name = "cherman2", base_addr = "ssh://git@github.com/cherman2" },
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{ name = "ebolyen", base_addr = "ssh://git@github.com/ebolyen" },
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{ name = "gregcaporaso", base_addr = "ssh://git@github.com/gregcaporaso" },
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{ name = "lizgehret", base_addr = "ssh://git@github.com/lizgehret" },
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{ name = "nbokulich", base_addr = "ssh://git@github.com/nbokulich" },
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{ name = "thermokarst-forks", base_addr = "ssh://git@github.com/thermokarst-forks" },
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]
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# github-thermokarst-forks-caporaso-lab
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/caporaso-lab"
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origin.name = "caporaso-lab"
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repos = [
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"caporaso-lab.github.io",
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"code-of-conduct",
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"genome-sampler",
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"pretrained-feature-classifiers",
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"q2-phylogenomics",
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]
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remotes = [
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{ name = "ebolyen", base_addr = "ssh://git@github.com/ebolyen" },
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{ name = "gregcaporaso", base_addr = "ssh://git@github.com/gregcaporaso" },
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{ name = "thermokarst-forks", base_addr = "ssh://git@github.com/thermokarst-forks" },
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]
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# github-thermokarst-forks-biocore
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/biocore"
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origin.name = "biocore"
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repos = [
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"deblur",
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"emperor",
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"gneiss",
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"scikit-bio",
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]
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remotes = [
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{ name = "ebolyen", base_addr = "ssh://git@github.com/ebolyen" },
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{ name = "thermokarst-forks", base_addr = "ssh://git@github.com/thermokarst-forks" },
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]
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# github-thermokarst-forks-bokulich-lab
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/bokulich-lab"
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origin.name = "bokulich-lab"
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repos = [
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"RESCRIPt",
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]
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remotes = [
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{ name = "nbokulich", base_addr = "ssh://git@github.com/nbokulich" },
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{ name = "thermokarst-forks", base_addr = "ssh://git@github.com/thermokarst-forks" },
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]
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# github-thermokarst-forks-conda-forge
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/conda-forge"
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origin.name = "conda-forge"
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repos = [
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"biom-format-feedstock",
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"ijson-feedstock",
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"scikit-bio-feedstock",
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]
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remotes = [
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{ name = "thermokarst-forks", base_addr = "ssh://git@github.com/thermokarst-forks" },
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]
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# github-gregcaporaso
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[[workspace]]
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path = "$HOME/projects/qiime2"
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ssh_key_path = "$HOME/.ssh/id_ecdsa"
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origin.base_addr = "ssh://git@github.com/gregcaporaso"
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origin.name = "gregcaporaso"
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repos = [
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"caporaso-lab-secrets",
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"qiime2-meta-figures",
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]
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remotes = []
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@ -68,3 +68,12 @@ function back_things_up() {
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function devlog() {
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vim -c 'Goyo' '+normal Go' +startinsert ~/projects/personal/devlog/logs/$(date '+%Y-%m-%d').gmi
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}
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# NOTE: this might need a mapped network drive to work (e.g. Z:\)
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function cmd() {
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CMD=$1
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shift;
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ARGS=$@
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WIN_PWD=$(wslpath -w ${PWD})
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cmd.exe /c "pushd ${WIN_PWD} && ${CMD} ${ARGS}"
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}
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