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MAINT: vscode et al (#5)

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Matthew Ryan Dillon 2020-02-23 16:25:07 -07:00 • committed by GitHub
parent 98c89a360d
commit d070b2d27a
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21 changed files with 531 additions and 734 deletions
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7
vscode/keybindings.json Normal file
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[
{
"key": "ctrl+w k",
"command": "workbench.action.focusActiveEditorGroup",
"when": "!editorFocus"
}
]

380
vscode/projects.json Normal file
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[
{
"enabled": true,
"group": "qiime2",
"name": "keemei",
"paths": [],
"rootPath": "$home/src/qiime2/Keemei"
},
{
"enabled": true,
"group": "qiime2",
"name": "busywork",
"paths": [],
"rootPath": "$home/src/qiime2/busywork"
},
{
"enabled": true,
"group": "qiime2",
"name": "data.qiime2.org",
"paths": [],
"rootPath": "$home/src/qiime2/data.qiime2.org"
},
{
"enabled": true,
"group": "qiime2",
"name": "dev-docs",
"paths": [],
"rootPath": "$home/src/qiime2/dev-docs"
},
{
"enabled": true,
"group": "qiime2",
"name": "discourse-unhandled-tagger",
"paths": [],
"rootPath": "$home/src/qiime2/discourse-unhandled-tagger"
},
{
"enabled": true,
"group": "qiime2",
"name": "docs",
"paths": [],
"rootPath": "$home/src/qiime2/docs"
},
{
"enabled": true,
"group": "qiime2",
"name": "environment-files",
"paths": [],
"rootPath": "$home/src/qiime2/environment-files"
},
{
"enabled": true,
"group": "qiime2",
"name": "galaxy",
"paths": [],
"rootPath": "$home/src/qiime2/galaxy"
},
{
"enabled": true,
"group": "qiime2",
"name": "library",
"paths": [],
"rootPath": "$home/src/qiime2/library"
},
{
"enabled": true,
"group": "qiime2",
"name": "logos",
"paths": [],
"rootPath": "$home/src/qiime2/logos"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-alignment",
"paths": [],
"rootPath": "$home/src/qiime2/q2-alignment"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-composition",
"paths": [],
"rootPath": "$home/src/qiime2/q2-composition"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-cutadapt",
"paths": [],
"rootPath": "$home/src/qiime2/q2-cutadapt"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-dada2",
"paths": [],
"rootPath": "$home/src/qiime2/q2-dada2"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-deblur",
"paths": [],
"rootPath": "$home/src/qiime2/q2-deblur"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-demux",
"paths": [],
"rootPath": "$home/src/qiime2/q2-demux"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-diversity",
"paths": [],
"rootPath": "$home/src/qiime2/q2-diversity"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-diversity-lib",
"paths": [],
"rootPath": "$home/src/qiime2/q2-diversity-lib"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-emperor",
"paths": [],
"rootPath": "$home/src/qiime2/q2-emperor"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-feature-classifier",
"paths": [],
"rootPath": "$home/src/qiime2/q2-feature-classifier"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-feature-table",
"paths": [],
"rootPath": "$home/src/qiime2/q2-feature-table"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-fragment-insertion",
"paths": [],
"rootPath": "$home/src/qiime2/q2-fragment-insertion"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-gneiss",
"paths": [],
"rootPath": "$home/src/qiime2/q2-gneiss"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-longitudinal",
"paths": [],
"rootPath": "$home/src/qiime2/q2-longitudinal"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-metadata",
"paths": [],
"rootPath": "$home/src/qiime2/q2-metadata"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-phylogeny",
"paths": [],
"rootPath": "$home/src/qiime2/q2-phylogeny"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-quality-control",
"paths": [],
"rootPath": "$home/src/qiime2/q2-quality-control"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-quality-filter",
"paths": [],
"rootPath": "$home/src/qiime2/q2-quality-filter"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-sample-classifier",
"paths": [],
"rootPath": "$home/src/qiime2/q2-sample-classifier"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-taxa",
"paths": [],
"rootPath": "$home/src/qiime2/q2-taxa"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-types",
"paths": [],
"rootPath": "$home/src/qiime2/q2-types"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2-vsearch",
"paths": [],
"rootPath": "$home/src/qiime2/q2-vsearch"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2cli",
"paths": [],
"rootPath": "$home/src/qiime2/q2cli"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2cwl",
"paths": [],
"rootPath": "$home/src/qiime2/q2cwl"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2galaxy",
"paths": [],
"rootPath": "$home/src/qiime2/q2galaxy"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2studio",
"paths": [],
"rootPath": "$home/src/qiime2/q2studio"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2templates",
"paths": [],
"rootPath": "$home/src/qiime2/q2templates"
},
{
"enabled": true,
"group": "qiime2",
"name": "q2view",
"paths": [],
"rootPath": "$home/src/qiime2/q2view"
},
{
"enabled": true,
"group": "qiime2",
"name": "qiime2",
"paths": [],
"rootPath": "$home/src/qiime2/qiime2"
},
{
"enabled": true,
"group": "qiime2",
"name": "qiime2.github.io",
"paths": [],
"rootPath": "$home/src/qiime2/qiime2.github.io"
},
{
"enabled": true,
"group": "qiime2",
"name": "template-repo",
"paths": [],
"rootPath": "$home/src/qiime2/template-repo"
},
{
"enabled": true,
"group": "qiime2",
"name": "view.qiime2.org",
"paths": [],
"rootPath": "$home/src/qiime2/view.qiime2.org"
},
{
"enabled": true,
"group": "qiime2",
"name": "vm-playbooks",
"paths": [],
"rootPath": "$home/src/qiime2/vm-playbooks"
},
{
"enabled": true,
"group": "qiime2",
"name": "workshop-playbooks",
"paths": [],
"rootPath": "$home/src/qiime2/workshop-playbooks"
},
{
"enabled": true,
"group": "qiime2",
"name": "workshops.qiime2.org",
"paths": [],
"rootPath": "$home/src/qiime2/workshops.qiime2.org"
},
{
"enabled": true,
"group": "thermokarst",
"name": "ccdb-api",
"paths": [],
"rootPath": "$home/src/thermokarst/ccdb-api"
},
{
"enabled": true,
"group": "thermokarst",
"name": "ccdb-web",
"paths": [],
"rootPath": "$home/src/thermokarst/ccdb-web"
},
{
"enabled": true,
"group": "thermokarst",
"name": "fathm",
"paths": [],
"rootPath": "$home/src/thermokarst/fathm"
},
{
"enabled": true,
"group": "thermokarst",
"name": "tucotuco",
"paths": [],
"rootPath": "$home/src/thermokarst/tucotuco"
},
{
"enabled": true,
"group": "caporaso-lab",
"name": "caporaso-lab.github.io",
"paths": [],
"rootPath": "$home/src/caporaso-lab/caporaso-lab.github.io"
},
{
"enabled": true,
"group": "caporaso-lab",
"name": "pretrained-feature-classifiers",
"paths": [],
"rootPath": "$home/src/caporaso-lab/pretrained-feature-classifiers"
},
{
"enabled": true,
"group": "gregcaporaso",
"name": "caporaso-lab-secrets",
"paths": [],
"rootPath": "$home/src/gregcaporaso/caporaso-lab-secrets"
},
{
"enabled": true,
"group": "gregcaporaso",
"name": "qiime2-meta-figures",
"paths": [],
"rootPath": "$home/src/gregcaporaso/qiime2-meta-figures"
},
{
"enabled": true,
"group": "",
"name": "dotfiles",
"paths": [],
"rootPath": "$home/.dotfiles"
}
]

14
vscode/settings.json Normal file
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{
"editor.cursorStyle": "block",
"editor.minimap.enabled": false,
"telemetry.enableTelemetry": false,
"telemetry.enableCrashReporter": false,
"workbench.colorTheme": "Base16 Dark Ashes",
"window.zoomLevel": 0,
"window.restoreFullscreen": true,
"python.jediEnabled": false
}

10
vscode/tasks.json Normal file
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{
"version": "2.0.0",
"tasks": [
{
"label": "q2 test",
"type": "shell",
"command": "make test"
}
]
}