bactdb

thermokarst/bactdb

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50c09481ec Better signing error, setup api test certs. Matthew Dillon 2015-01-05 14:51:31 -09:00
3203c63237 Using codegangsta/cli, specify keys at runtime Matthew Dillon 2015-01-05 14:16:50 -09:00
7a59ef6be3 Can specify certs now Matthew Dillon 2015-01-05 14:16:15 -09:00
d081639b88 WIP Matthew Dillon 2015-01-05 13:27:37 -09:00
28f29f3d68 can serve (hackish) Matthew Dillon 2015-01-05 11:50:42 -09:00
2f3aa58af6 Bump year Matthew Dillon 2015-01-05 09:45:58 -09:00
2aab7a5932 Bump golang 1.4 Matthew Dillon 2014-12-22 08:48:18 -09:00
ea73ecedb9 Working on securing routes and adding auth levels. Matthew Dillon 2014-12-18 11:14:55 -09:00
f912a434b5 Users: NullTime, removing transaction from insert. Matthew Dillon 2014-12-17 15:29:13 -09:00
950b15a117 Renaming observations to characteristics Matthew Dillon 2014-12-12 10:34:56 -09:00
c1323f9c1f Renaming observation types to characteristic types Matthew Dillon 2014-12-12 10:24:59 -09:00
be9e6481d0 Roughing in JWT-based authentication. Todo: Actually utilize this stuff somewhere. Matthew Dillon 2014-12-06 21:54:17 -09:00
8dc07e3cc8 Cleaning up null values in json Matthew Dillon 2014-12-06 14:32:58 -09:00
bc6e585b8d Updating measurement model (test methods) Matthew Dillon 2014-12-03 15:33:28 -09:00
3d2dd015a2 Adding table ‘test_methods’ Matthew Dillon 2014-12-03 15:25:59 -09:00
b15eb217ef Explicit schema + FK indices. Matthew Dillon 2014-12-03 14:59:59 -09:00
d092637b33 Measurements can be one of three types. Matthew Dillon 2014-12-03 13:52:21 -09:00
641203ceb9 Adding ‘isolated from’ to strains. Matthew Dillon 2014-12-03 13:14:58 -09:00
f33205e721 Measurements — adding notes, changing schema Matthew Dillon 2014-12-03 12:51:36 -09:00
4eecb36e34 Delete a measurement Matthew Dillon 2014-12-02 14:45:00 -09:00
bc3c724a1d Update a measurement Matthew Dillon 2014-12-02 14:37:53 -09:00
d462935682 List measurements Also, fixed typo in router. Matthew Dillon 2014-12-02 14:26:51 -09:00
87ac729c98 Create a measurement Matthew Dillon 2014-12-01 10:14:22 -09:00
ca1fbe882c Get a measurement Matthew Dillon 2014-11-30 20:05:54 -09:00
eccbffb86d Delete a unit type Matthew Dillon 2014-11-30 16:10:38 -09:00
76baee1fa7 Update a unit type Matthew Dillon 2014-11-30 15:55:02 -09:00
dfa2dd2eba Text measurement type reporting wrong error Matthew Dillon 2014-11-30 15:49:04 -09:00
d535cd85ff List unit types Matthew Dillon 2014-11-30 15:33:28 -09:00
b7caffa373 Create a unit type Matthew Dillon 2014-11-30 15:11:51 -09:00
c2bfc8b93b Get a unit type Matthew Dillon 2014-11-29 17:20:47 -09:00
431ba7ed91 Delete a text measurement type Matthew Dillon 2014-11-28 17:26:01 -09:00
49621ca27b Update a text measurement type Matthew Dillon 2014-11-27 11:34:42 -09:00
e368426aad List text measurement types Matthew Dillon 2014-11-26 22:51:09 -09:00
b1dad9bfbd Create text measurement type Matthew Dillon 2014-11-26 22:13:46 -09:00
3e0ca9df8c Get a text measurement type Matthew Dillon 2014-11-26 21:56:25 -09:00
72078cf6e4 Typo in Mock Observations Service check. Matthew Dillon 2014-11-26 18:10:03 -09:00
88cbefc8fe Missed the table rename for downgrade (meas). Matthew Dillon 2014-11-26 17:52:45 -09:00
4bbd67dd4f Tweaking JSON field naming convention for emberjs Matthew Dillon 2014-11-26 17:18:22 -09:00
aadb24bf33 Consolidating strainsobservations & measurements. Matthew Dillon 2014-11-26 16:47:57 -09:00
5bee929694 Renaming StrainObsMeasurements -> Measurements. Matthew Dillon 2014-11-21 19:03:58 -09:00
952224e2df Delete an observation Matthew Dillon 2014-11-21 18:58:07 -09:00
b90da728fe Update an observation Matthew Dillon 2014-11-21 16:48:55 -09:00
dac0721a41 List observations. Matthew Dillon 2014-11-20 15:48:59 -09:00
f867e5c424 Create a new observation Matthew Dillon 2014-11-20 10:36:21 -09:00
a018d2bd7a Get an observation. Matthew Dillon 2014-11-18 10:41:24 -09:00
01036de04d Fixes #8: merges measurement tables. Matthew Dillon 2014-11-13 17:12:04 -09:00
68b98f6d6b Delete an observation type Matthew Dillon 2014-11-10 15:24:16 -09:00
73f7b580c1 Update observation types. Matthew Dillon 2014-11-10 15:13:45 -09:00
186edad1db List Observation types Matthew Dillon 2014-11-07 16:45:46 -09:00
9326a06699 Adding in translated measurement view Matthew Dillon 2014-11-05 15:28:46 -09:00
0e767390b5 create an observation type Matthew Dillon 2014-11-04 16:13:55 -09:00
4fd7bf8eba Get an observation type Matthew Dillon 2014-11-03 16:12:50 -09:00
bedddfdec1 Setting created & update cols. Matthew Dillon 2014-11-02 20:48:10 -09:00
f48ee87ccd NullTime in normalizeTime & tests Matthew Dillon 2014-10-31 09:38:49 -08:00
58344b82a5 Importing data, realized need to handle NULLs. Matthew Dillon 2014-10-30 16:24:15 -08:00
df95dfc930 Delete strain. Matthew Dillon 2014-10-29 14:11:50 -08:00
ff0e37d2ef Update strain. Fixed EML/EMBL typo in json. Matthew Dillon 2014-10-29 13:39:31 -08:00
b8bda910cd List strains. Matthew Dillon 2014-10-29 13:23:25 -08:00
6bba9058aa Create a strain. Matthew Dillon 2014-10-29 13:09:54 -08:00
6c118f47f7 Get a strain. Matthew Dillon 2014-10-28 16:14:14 -08:00
20d65bd561 Minor whitespace cleanup. Matthew Dillon 2014-10-27 15:40:53 -08:00
94973aa1f7 Cleaning up route names Matthew Dillon 2014-10-26 17:10:54 -08:00
c088386a00 Refactoring model & api tests. Matthew Dillon 2014-10-24 15:40:55 -08:00
cb383d84e7 #7: datastore convenience functions. Matthew Dillon 2014-10-24 15:11:08 -08:00
b50084c7a6 Merge pull request #5 from thermokarst/species Matthew Dillon 2014-10-24 10:45:14 -08:00
4669aff3c2 Species - delete Matthew Dillon 2014-10-24 10:42:31 -08:00
22d2b8b41d Finishing up changes from previous commit Matthew Dillon 2014-10-24 10:08:12 -08:00
8580c9b54e Adding basic dockerfile Matthew Dillon 2014-10-23 18:50:43 -08:00
c8d1d0a84f species update wip Matthew Dillon 2014-10-23 18:25:15 -08:00
5244ae529a Species: List species. Matthew Dillon 2014-10-23 17:29:07 -08:00
b045ded9cd Importing base schema Matthew Dillon 2014-10-16 09:41:01 -08:00
7e74d672ba Using struct attrs to match desired db schema Matthew Dillon 2014-10-16 09:20:25 -08:00
7fe5566edf Create species, cleanup schema. - create species - species genus_id not null Matthew Dillon 2014-10-15 16:43:09 -08:00
ed2ba26654 Removed commented portion Matthew Dillon 2014-10-15 14:11:17 -08:00
830a8805c9 Species Read - Order of ops: Matthew Dillon 2014-10-15 13:01:11 -08:00
6fe6d5d189 Left 'post' instead of 'user' Matthew Dillon 2014-10-13 15:34:08 -08:00
205a932e2a Merge pull request #4 from thermokarst/genus Matthew Dillon 2014-10-13 15:32:49 -08:00
279651930e A few big changes - Adding timezone to source config - genera: update record (missed a few pieces) - genera: delete record Matthew Dillon 2014-10-13 15:26:35 -08:00
33194ffd2f Genera: update record. Matthew Dillon 2014-10-13 12:22:50 -08:00
c271f4b6b3 sslmode declared in datastore. Matthew Dillon 2014-10-13 10:17:20 -08:00
59a0cfd4bf Genera: api. Matthew Dillon 2014-10-13 10:15:33 -08:00
533adbdd09 Genera: datastore. Matthew Dillon 2014-10-13 09:55:20 -08:00
9155ee88f1 Genera: router & models Matthew Dillon 2014-10-13 09:23:02 -08:00
08ae818d74 Fixes #2: Don’t log error if db is new. Matthew Dillon 2014-10-07 20:48:20 -08:00
8fa594e3f0 DB Migrations Replacing modl’s built-in table creation and removal with manual migrations. Thanks to @DavidHuie for gomigrate! Matthew Dillon 2014-10-06 17:09:41 -08:00
c5f94ab67d Adding travis build badge to README. Matthew Dillon 2014-10-03 16:05:56 -08:00
10a3a604be Merge pull request #1 from thermokarst/initial-architecture Matthew Dillon 2014-10-03 16:03:34 -08:00
b3d39f7630 Adding travis-ci config. Matthew Dillon 2014-10-03 16:00:45 -08:00
f0cd2c1d79 Turning on modl database trace. Matthew Dillon 2014-10-03 15:52:49 -08:00
1f12c9eb09 Fixing up API tests. Matthew Dillon 2014-10-03 15:52:17 -08:00
0eae5fc6b8 Added API tests. Matthew Dillon 2014-10-02 16:41:13 -08:00
c0b54d821e User creation, DB transactions, createdb flag changes. Matthew Dillon 2014-10-01 13:09:36 -08:00
e1685bd32b API endpoints. Matthew Dillon 2014-09-30 16:03:16 -08:00
1e283e7cd6 Working in PG datastore. Matthew Dillon 2014-09-30 15:13:36 -08:00
76d5264474 Adding list() to client & api route. Matthew Dillon 2014-09-30 09:51:07 -08:00
da7be2e150 Rocking github.com/sourcegraph/thesrc template - Working in client, router, and basic models (user) Matthew Dillon 2014-09-23 16:39:45 -08:00
a1d954d5fd Including Sourcegraph in License Matthew Dillon 2014-09-23 17:40:11 -08:00
9cdc297f00 Tweaking some of GH's initial repo choices Matthew Dillon 2014-09-23 16:21:41 -08:00
fe0a50a183 Initial commit Matthew Dillon 2014-09-23 16:16:59 -08:00